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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs112753877 chr7:130306483 C/T 3.02E-5 1023 22.3 20.17 17.93 KM Plot
BRCA rs112878505 chr8:52416615 CT/C 1.02E-5 1015 21.17 23.37 20.68 KM Plot
BRCA rs113196630 chr10:16597064 G/GT 5.1E-6 1017 23.57 19.2 16.25 KM Plot
BRCA rs11346691 chr20:25119259 AT/A 7.32E-6 1022 22.2 22.77 13.17 KM Plot
BRCA rs113606261 chr1:41489157 C/T 1.75E-5 1020 21.8 20.5 11.2 KM Plot
BRCA rs113955756 chr6:43151186 C/T 1.66E-13 1019 21.7 20.9 10.73 KM Plot
BRCA rs114475395 chr18:44691010 A/G 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs114476379 chr2:86494500 G/C 2.25E-6 1025 21.8 19.47 12.17 KM Plot
BRCA rs11468669 chr20:2754256 TGG/T 1.33E-5 1022 22.17 20.73 12.32 KM Plot
BRCA rs114791283 chr7:54818224 G/A 7.89E-6 1028 21.43 23.83 12.17 KM Plot
BRCA rs114910074 chr7:54811883 A/T 7.89E-6 1028 21.43 23.83 12.17 KM Plot
BRCA rs11528671 chr10:16597499 A/G 2.57E-9 1023 22.2 19.67 14.2 KM Plot
BRCA rs11528673 chr10:16598543 A/G 7.65E-8 1010 22.57 19.35 16.48 KM Plot
BRCA rs115408136 chr7:54814598 T/C 7.89E-6 1028 21.43 23.83 12.17 KM Plot
BRCA rs11574686 chr19:15167088 A/G 1.35E-5 1020 21.48 23.7 11.98 KM Plot